Manuscript accepted on : 10 12 2022
Published online on: 19-12-2022
Plagiarism Check: Yes
Reviewed by: Dr. Daya Shankar Gautam
Second Review by: Dr. Anoma Dongsansuk
Final Approval by: Dr. Eugene A. Silow
Anees Fathima1, H. M. Vagdevi1*, R. Mohammed Shafeeulla1, Lubna Afroz2, S. H. Shreedhara1
1Department of Chemistry, Sahyadri Science College, Kuvempu University, Shimoga, Karnataka, India.
2Department of Chemistry, JNN College of Engineering (VTU), Shimoga, Karnataka, India.
Corresponding Author E-mail:vagdevihm17@gmail.com
DOI : http://dx.doi.org/10.13005/bbra/3040
ABSTRACT: An efficient, cost effective and ecologically safe method for the design of series of novel 2-[(4-chloro-1,3-benzoxazol-2-yl)sulfanyl]-N'-[phenylmethylidene] acetohydrazides 5(a-j) have been synthesized by fusing 2-[(4-chloro-1,3-benzoxazol-2-yl)sulfanyl] acetohydrazide with substituted aromatic aldehyde. The prepared compounds were characterized via LC-MS, IR, 1H NMR, 13C NMR and C, H, N analysis technique. All the synthesized compounds were evaluated for biological potency, which includes antimicrobial, antifungal, antioxidant and anticancer activities. The compounds 5a, 5b, 5d, 5e, 5g and 5h showed appreciable antimicrobial, MIC and antioxidant activity. Further, it was also noticed that the prior mentioned compounds showcased more than 70% of cell viability. We also performed molecular docking for all the synthesized compounds and examined their binding affinities to the anticancer receptor 2A91 to qualitatively elucidate their anticancer activity. The data generated from the molecular modeling and the values obtained from the biological screening were correlated.
KEYWORDS: Antimicrobial; Antioxidant; Benzoxazole; molecular docking; PDB: 2A91
Download this article as:Copy the following to cite this article: Fathima A, Vagdevi H. M, Shafeeulla R. M, Afroz L, Shreedhara S. H. Design, Synthesis, Computational Docking and Biological Evaluation of Novel 4-Chloro-1,3-Benzoxazole Derivatives as Anticancer Agents. Biosci Biotech Res Asia 2022;19(4). |
Copy the following to cite this URL: Fathima A, Vagdevi H. M, Shafeeulla R. M, Afroz L, Shreedhara S. H. Design, Synthesis, Computational Docking and Biological Evaluation of Novel 4-Chloro-1,3-Benzoxazole Derivatives as Anticancer Agents. Biosci Biotech Res Asia 2022;19(4). Available from: https://bit.ly/3FFglnx |
Introduction
As the practice of medicinal chemistry has evolved over time, it has dedicated its entire existence to discovering and developing new remedies for diseases 1. Furthermore, medicinal chemistry has always emphasized on re-establishing a connection between chemical structure and pharmacological activity. Besides heterocyclic compounds contributed the most to the invention of new medications and were extensively studied in clinical aspects. Benzoxazole derivatives being an integral part of the heterocycle family, have momentous pharmacological potentialities in the field of medicinal chemistry.
In research, benzoxazole finds its uses as a starting material for the synthesis of larger bioactive molecules. It has been found within the chemical structures of pharmaceutical medicines, like Flunoxaprofen. Despite the fact that as a heterocycle, its aromatic character makes it moderately stable, it possesses reactive sites, which allow functionalization 2. The basic aim of the synthetic and medicinal chemistry was to synthesize the compounds that results in high yields with greatest purity and show excellent activity as therapeutic agents with minimal toxicity. Eminent among these are anti-histaminic3, antifungal4, cyclooxygenase Inhibiting5, anti-tumor6, anti-ulcer7, anticonvulsant8, hypoglycemic9, anti-inflammatory10,11, anti-tubercular activity12, anti-parasitics13, herbicidal14, antiviral15, anti-allergic and anthelmintic activities16. Also, they have a number of optical applications such as photo luminescents, whitening agents and in dye lasers 17 and are also used as organic brightening agents and organic plastic scintillators 18.
The quest for new antimicrobial and antioxidant agents lacking side effects persists to be an active area of research in medicinal chemistry. Despite the development of new and important drugs, their cost was out of the reach of commoners. As a result, these changes have accentuated the urgent need for new, increasingly powerful, less expensive and safe antimicrobial agents. The current effort is intended for the design, synthesis, and investigation of novel benzoxazoles derivatives, with hydrazide serving as the parent molecule, based on the aforementioned facts. The synthesised derivatives of 2-[(4-chloro-1,3-benzoxazol-2-yl)sulfanyl]-N’-[phenylmethylidene]acetohydrazides 5(a-j) were tested for their antioxidant and cytotoxic activities as well as antibacterial activity against a number of chosen bacteria and fungi. To understand the binding affinity of produced derivatives with the active receptor sites, a molecular docking research was conducted.
Experimental
Materials and Instrumentation
An electrically heated apparatus was used to measure melting points that were uncorrected by placing the sample in a glass capillary sealed at one end. The 1H NMR and 13C NMR measurements were conducted via a Bruker at 400MHz at MIT, Manipal, Karnataka, India, with tetramethylsilane (TMS) as an internal standard and chemical shifts are expressed as 𝛿values (ppm). Analysis of elements like C, H, and N were performed by a Perkin-Elmer 2400 Series analyzer. At Centralized Instrumentation Facility of Mysore University, Karnataka, India, molecular weights of unknown compounds were characterized using LC-MS spectroscopy. A Shimadzu Fourier Transform Infrared (FT-IR Nicolet-5700) spectrometer was used to procure the FT-IR spectra of the compounds. A thin layer chromatography (TLC) method was used to examine the completion of the reaction using silica gel coated on aluminium sheets (silica gel 60 F254). Solvents and reagents of commercial grade were employed for synthesis purpose and Table 1 enlists the yields, melting points, molecular formula and molecular weight of the compounds.
Table 1: Physical data of synthesized compounds 5(a-j) comprising of molecular formula, molecular weight, percentage of carbon, hydrogen, nitogen, melting point and percentage of yield
Compounds |
Mol.formula |
Mol.wt |
Found(Calculated)% |
%Yield |
M.P(oC) |
||
C |
H |
N |
|||||
5a |
C16H11N3Cl2O2S |
380.24 |
50.54 (50.56) |
2.92 (2.94) |
11.05 (11.07) |
81 |
184 |
5b |
C16H11N4ClO4S |
390.8 |
49.17 (49.21) |
2.84 (2.86) |
14.34 (14.36) |
76 |
206 |
5c |
C18H17N4ClO2S |
388.8 |
55.59 (55.62) |
4.48 (4.50) |
14.41 (14.43) |
74 |
214 |
5d |
C17H14N3ClO4S |
391.8 |
52.11 (52.13) |
3.60 (3.63) |
10.72 (10.74) |
78 |
216 |
5e |
C16H11N4ClO4S |
390.8 |
49.17 (49.21) |
2.84 (2.86) |
14.34 (14.36) |
75 |
206 |
5f |
C16H11N3BrClO2S |
422.94 |
45.25 (45.27) |
2.61 (2.63) |
9.89 (9.91) |
83 |
186 |
5g |
C16H12N3ClO3S |
361.8 |
53.11 (53.14) |
3.34 (3.36) |
11.61 (11.64) |
78 |
230 |
5h |
C17H14N3ClO3S |
375.83 |
54.33 (54.36) |
3.75 (3.78) |
11.18 (11.20) |
82 |
216 |
5i |
C17H14N3ClO3S |
375.83 |
54.33 (54.36) |
3.75 (3.78) |
11.18 (11.20) |
79 |
210 |
5j |
C19H18N3ClO5S |
435.88 |
52.35 (52.37) |
4.16 (4.18) |
9.64 (9.66) |
76 |
204 |
Results and discussion
Design and synthesis of novel 4-chloro-1,3-benzoxazole derivatives
Preparation of 4-chloro-1,3-benzoxazole-2-thiol (2)
Methanol (50ml) and potassium hydroxide (1.1 eq) were combined and agitated for 10 minutes to start the reaction. Next, a measured amount of carbon di sulphide (1.1 eq) was slowly added at room temperature. As the aforementioned reaction mass was still being stirred, 4-chloro-2-aminophenol was added and simultaneously refluxed for 6 hours on a water bath. TLC was used to monitor the reaction till it was finished. On purpose, reaction mass was added to ice-cold water, which was then acidified with glacial aceticacid. Finally the procured solid was further filtered, dried and recrystallized 19. Yield (95%), M.P.1980C -1990C. MS:m/z = 185.93 and (M+2) = 187.93.
Preparation of ethyl [(4-chloro-1,3-benzoxazol-2-yl)sulfanyl]acetate (3):
Ethyl chloroacetate was added drop wise in the presence of K2CO3 after completely dissolving the 2-mercaptothiozole in acetone upon continuous stirring in a reaction flask. For nearly 4-5 hours the resultant mixture was refluxed and poured over freezing water. The obtained semisolid was washed repeatedly with water. The formed crystals after filtration were washed completely with water and dried which was further recrystallized from ethanol 20. Yield (95%), M.P. 1980C -1990C.
Synthesis of 2-[(4-chloro-1,3-benzoxazol-2-yl)sulfanyl]acetohydrazide (4):
The flask containing 20 ml of methanol along with the compound 3 were stirred continuously for 15 min. The ester was added upon continuous by stirring for nearly 15 min. The hydrazine hydrate was added slowly to the above mentioned mixture which was agitated for 3 hours to get the desired product. The obtained semisolid compound was filtered and washed with pet ether. Finally the compound was collected after drying 21. 1HNMR (DMSO-d6,δppm): 7.347-7.725 (m,3H,Ar-H), 4.342 (d,2H,S-CH2), 4.080 (s,2H,NH2), 9.414(s,1H,NH); MS: m/z = 257.96.
General procedure for the synthesis of2-[(4-chloro-1,3-benzoxazol-2-yl)sulfanyl]-N’-[phenylmethylidene]acetohydrazides 5(a-j):
To an ethanolic solution (20ml), the hydrazide compound (1eq) and aromatic aldehyde (1.1eq) was added and stirred for 2-3 mins. To this mixture 2-3 drops of glacial acetic acid was added and refluxed on water bath for about 6 hours. After the completion of reaction the resultant product was added to the ice cold water and filtered, dried and recrystallized from ethanol to obtain pure product 22.
2-[(4-chloro-1,3-benzoxazol-2-yl)sulfanyl]-N’-[(4-chlorophenyl)methylidene]acetohydrazide (5a):
IR (KBr,cm-1): 3282 (N-H), 2362 (Ar-CH), 1681 (O=C-NH), 1450 (C=C), 1250 (C=N), 746 (C-S), 681 (C-Cl); 1HNMR (DMSO-d6,δppm): 7.14-7.6 (m,7H,Ar-H), 3.82 (d,2H,S-CH2), 8.0 (bs,1H,CH), 8.0(bs,1H,NH); 13C-NMR(DMSO-d6,δppm): 173, 165.0, 151.4 143.0, 140.5, 136.6, 131.9, 130.6, 130.6, 129.0, 129.0, 125.8, 125.3, 123.8, 108.8, 40.9; MS: m/z = 380.2.
2-[(4-chloro-1,3-benzoxazol-2-yl)sulfanyl]-N’-[(4-nitrophenyl)methylidene]acetohydrazide (5b):
IR(KBr,cm-1): 3280(N-H), 2367(Ar-CH), 1688(O=C-NH), 1452(C=C), 1328(C-NO2), 1252(C=N), 745(C-S), 680(C-Cl,Ar-H) ); 7.14-8.2 (m,7H), 3.82(d,2H,S-CH2), 8.0(s,1H,CH), 8.1(bs,1H,NH); 13C-NMR(DMSO-d6,δppm): 173, 165.0, 151.4, 148.2, 143.0, 140.5, 135.0, 131.9, 132.0, 130.1, 126.3, 125.8, 125.3, 123.8,121.2, 108.8, 40.9; MS: m/z=390.8.
2-[(4-chloro-1,3-benzoxazol-2-yl)sulfanyl]-N’-[(3-trimethylphenyl)methylidene] acetohydrazide (5c):
IR(KBr,cm-1): 3284(N-H), 2809(N-CH3), 2360(Ar-CH), 1692(O=C-NH), 1449(C=C), 1261(C=N), 744(C-S), 682(C-Cl); 1HNMR(DMSO-d6,δppm):6.6-7.27(m,7H,Ar-H), 3.82(d,2H,S-), 2.85(t,3H,CH3), 8.0(bs,1H,CH), 8.1(s,1H,NH); 13CNMR(DMSOd6,δppm):173, 165, 151.4, 149.7, 143.0, 140.5, 134.7, 129.8, 125.3, 123.8, 118.7, 116.6, 111.6, 108.8, 40.9,40.3; MS: m/z=388.8.
2-[(4-chloro-1,3-benzoxazol-2-yl)sulfanyl]-N’-[(3-methoxy,4-hydroxyphenylmethylidene] acetohydrazide (5d):
IR(KBr,cm-1): 3280(N-H), 2367(Ar-CH),1688(O=C-NH), 1452(C=C), 1328(C-NO2), 1252(C=N), 745(C-S), 680(C-Cl); 1HNMR(DMSO-d6,δppm):12.071(bs,1H,-NH), 9.531(s,1H,OH), 8.076(s,1H,-CH), 7.504-6.816(m,6H,Ar-H), 4.006(d,2H,S-CH2), 3.812(s,3H,-OCH3); 13CNMR(DMSOd6,δppm):161.05, 149.20, 148.43, 147.31, 146.41, 128.69, 125.90, 121.86, 121.11, 116.44, 115.97, 110.78, 109.56, 56.04 ;MS: m/z=391.27, (M+1)=392.14.
2-[(4-chloro-1,3-benzoxazol-2-yl)sulfanyl]-N’-[(4-nitrophenyl)methylidene]acetohydrazide (5e):
IR(KBr,cm-1): 3280(N-H), 2367(Ar-CH), 1688(O=C-NH), 1452(C=C), 1328(C-NO2), 1252(C=N), 745(C-S), 680(C-Cl); 7.14-8.2(m,7H,Ar-H), 3.82(d,2H,S-CH2), 8.0(s,1H,CH), 8.1(bs,1H,NH); 13C-NMR(DMSO-d6,δppm):173, 165.0, 151.4, 148.2, 143.0, 140.5, 135.0, 131.9, 132.0, 130.1, 126.3, 125.8, 125.3, 123.8, 121.2, 108.8, 40.9; MS: m/z =390.8
2-[(4-chloro-1,3-benzoxazol-2-yl)sulfanyl]-N’-[(2-bromophenyl)methylidene] acetohydrazide (5f):
IR (KBr,cm-1): 3285 (N-H), 2366 (Ar–CH), 1683 (O=C-NH), 1450 (C=C), 1252 (C=N), 744(C-S), 685 (C-Cl), 601 (C-Br); 1HNMR (DMSO-d6,δppm): 11.837 (bs,1H,-NH), 8.697 (s,1H,-CH), 8.197-7.349 (m,7H,Ar-H), 4.687 (d,2H,S-CH2),3.812;13C-NMR (DMSOd6,δppm): 168.52, 166.68, 163.37, 150.73, 146.76, 143.60, 143.15, 133.91, 132.61, 130.79, 129.54, 124.91, 123.88, 118.67, 112.07, 35.35; MS:m/z = 423.86,(M+2) = 425.85.
2-[(4-chloro-1,3-benzoxazol-2-yl)sulfanyl]-N’-[(4-hydroxyphenyl)methylidene] acetohydrazide(5g):
IR(KBr,cm-1): 3445(O-H), 3287(N-H), 2368(Ar-CH), 1686(O=C-NH), 1455(C=C), 1253(C=N), 749(C-S), 682(C-Cl); 1HNMR(DMSO-d6,δppm): 12.071(bs,1H,-NH), 9.531(s,1H,OH), 8.1 (s,1H,-CH), 6.82-7.27(m,7H,Ar-H), 3.82(d,2H,S-CH2); 13C-NMR(DMSO-d6,δppm): 173, 160.8, 165.0, 151.4, 143.0, 140.5, 130.6, 126.4, 125.8, 125.3, 123.8, 116, 108.8, 40.9; MS:m/z =361.8.
2-[(4-chloro-1,3-benzoxazol-2-yl)sulfanyl]-N’-[(3-methoxyphenyl)methylidene] acetohydrazide (5h):
IR(KBr,cm-1):3289(N-H), 2864(-OCH3), 2366(Ar-CH), 1684(O=C-NH), 1454(C=C), 1259(C=N), 751(C-S), 688(C-Cl); 1HNMR(DMSO-d6,δppm): 12.071(bs,1H,-NH), 9.531(s,1H,OH), 8.1(s,1H,-CH), 6.82-7.27 (m,7H,Ar-H), 3.82 (d,2H,S-CH2), 3.73(3H,-OCH3); 13C NMR(DMSO-d6,δppm): 173, 163, 145.8, 143.0, 134.3, 130.2, 130.2, 126.6, 126.1, 122.3, 121.6, 114.8, 114.4, 114.4, 53.9, 34.4; MS: m/z=375.4.
2-[(4-chloro-1,3-benzoxazol-2-yl)sulfanyl]-N’-[(4methoxyphenyl)methylidene]acetohydrazide (5i):
IR(KBr,cm-1): 3286(N-H), 2866(-OCH3), 2369(Ar-CH), 1683(O=C-NH), 1450(C=C), 1255(C=N), 752(C-S), 680(C-Cl); 1HNMR(DMSO-d6,δppm): 11.771(bs,1H,-NH), 8.163(s,1H,-CH), 8.137-6.979(m,7H,Ar-H), 4.670(d,2H,S-CH2), 3.776(3H,-OCH3); 13CNMR(DMSO-d6,δppm): 168.32, 166.25, 159.98, 150.57, 144.41, 135.74, 130.40, 129.35, 124.64, 120.0, 118.51, 116.33, 113.18, 112.22, 111.91, 55.642; MS: m/z=375.95, (M+2)=377.95.
2-[(4-chloro-1,3-benzoxazol-2-yl) sulfanyl]- N’-[(3,4,5-trimethoxy phenyl) methylidene] acetohydrazide (5j):
IR(KBr,cm-1):3278(N-H), 2860(-OCH3), 2371(Ar-CH), 1677(O=C-NH), 1457(C=C), 1249(C=N), 750(C-S), 686(C-Cl); 1HNMR(DMSO-d6,δppm):11.771(bs,1H,-NH), 8.163(s,1H,-CH), 7.27-6.6(m,5H,Ar-H), 3.82(2H,S-CH2), 3.73(9H,-OCH3); 13CNMR(DMSO-d6,δppm):173, 165.0, 150.9, 150.9, 151.4, 143.0, 141.5, 140.5, 128.1, 125.8, 125.3, 123.8, 108.8, 106. 7, 106.7, 56.5, 56.2, 40.9 ; MS: m/z=435.88
Scheme 1: Synthesis of substituted of 2-[(4-chloro-1,3-benzoxazol-2-yl)sulfanyl]-N’-[phenylmethylidene] acetohydrazide derivatives. |
Biological Activities of novel 4-chloro-1,3-benzoxazole derivatives
Antibacterial Activity of compounds 5(a-j):
Novel benzoxazole derivatives were synthesized and tested for antibacterial activity by using the agar well diffusion method against Gram-positive bacteria, specifically Staphylococcus aureus and Bacillus subtillus, and Gram-negative bacteria Pseudomonas aeruginosa and Klebsiella pneumonia [23]. The 24 hour old Mueller-Hinton broth culture of test bacteria was swabbed on sterile Mueller-Hint on agar plates with the help of sterile cotton swab, which was continued by punching wells of 6mm with the aid of sterile cork borer. To the corresponding specified wells, the standard drug (Chloramphenicol, 1mg/mL of sterile distilled water), compounds 5(a-j) (250 µg/ml in 10% DMSO) and control (10% DMSO) were added. The plates were left to stand for nearly 30 minutes and incubated for 24 hour at 370C in upright position and the zone of inhibition was observed and enlisted in Table 2 and represented in Figure1.
Table 2: Antibacterial activity of synthesized compounds 5(a-j) using the agar well diffusion method against Gram-positive bacteria, specifically Staphylococcus aureus and Bacillus subtillus, and Gram-negative bacteria Pseudomonas aeruginosa and Klebsiella pneumonia
Compound |
K. pneumoniae |
P. aeruginosa |
B .subtilis |
S .aureus |
5a |
19±0.81 |
18±0.94 |
16±1.24 |
18±0.94 |
5b |
15±1.24 |
14±0.42 |
15±0.42 |
15±0.94 |
5c |
14±0.94 |
13±1.24 |
12±0.94 |
13±0.47 |
5d |
16±0.47 |
15±0.81 |
15±1.24 |
16±0.71 |
5e |
17±0.71 |
16±0.94 |
15±0.81 |
17±0.94 |
5f |
18±1.24 |
17±0.71 |
16±0.42 |
15±0.71 |
5g |
18±0.42 |
16±0.81 |
15±1.24 |
16±0.81 |
5h |
15±0.94 |
14±1.24 |
14±0.81 |
13±1.24 |
5i |
13±1.24 |
13±0.47 |
14±0.42 |
13±0.94 |
5j |
10±0.81 |
10±0.94 |
10±0.81 |
11±0.94 |
STD |
23±0.42 |
20±0.47 |
19±0.94 |
21±0.47 |
*STD=Chloramphenicol compound =250 𝜇g/ml
*Each value is expressed as the mean ± SD of three replicates for the zone of inhibition.
Figure 1: Antibacterial activity bar graph representing the zone of inhibition of synthesized compounds 5(a-j). |
Antifungal activity of compounds 5(a-j):
Antifungal activity of the compounds 5(a-j) were evaluated against fungal strains Gram positive fungi Candida albicans, Cryptococcus neoformans and Gram negative fungus Aspergillus niger, Pencillium using the sabouraud dextrose agar diffusion method23. Wells were prepared (9 mm diameter) with a sterile cork borer. The standard medication (fluconazole, 100 g/mL of sterile distilled water) and control (10% DMSO) were added to the individually labelled wells. To these wells, compounds 5(a-j) (250 µg/mL of 10% DMSO) and control (10% DMSO) were added and the plates were permitted to cool for an hour to facilitate the diffusion. At 37 ºC, the plates were then incubated for 48 hours. At the final of the incubation period, the diameter of the zone of inhibition around the wells was estimated using vernier callipers and observed data are indexed in Table 3 and shown in Figure 2.
Table 3: Antifungal activity of synthesized compounds 5(a-j) using the sabouraud dextrose agar diffusion method against fungal strains Gram positive fungi Candida albicans, Cryptococcus neoformans and Gram negative fungus Aspergillus niger, Pencillium
Compound |
C. albicans |
C.neoformans |
A.niger |
Penicillium |
5a |
24±0.47 |
22±0.94 |
23±1.24 |
19±0.81 |
5b |
23±0.81 |
19±1.69 |
18±0.94 |
15±0.47 |
5c |
20±1.24 |
17±0.47 |
16±0.81 |
13±0.94 |
5d |
20±0.94 |
18±0.81 |
20±0.47 |
16±1.24 |
5e |
21±1.88 |
20±0.94 |
21±0.47 |
18±0.81 |
5f |
24±1.69 |
20±0.81 |
22±0.94 |
18±1.24 |
5g |
23±0.81 |
19±0.47 |
21±1.24 |
17±0.94 |
5h |
19±0.47 |
17±1.24 |
20±1.88 |
19±0.81 |
5i |
19±0.94 |
15±1.24 |
18±0.81 |
16±1.88 |
5j |
18±1.24 |
15±0.94 |
14±0.81 |
15±1.69 |
Std |
27±0.47 |
28±0.81 |
29±1.24 |
25±0.94 |
*STD=Chloramphenicol compound
*Each value is expressed as the mean ± SD of three replicates for the zone of inhibition.
Figure 2: Antifungal activity bar graph representing the zone of inhibition of synthesized compounds 5(a-j). |
Minimum Inhibitory Concentration(MIC)
All the synthesized compounds have undergone testing for antibacterial and antifungal activity. Using the serial dilution technique, the Minimum inhibitory concentration (MIC) of the synthesized compounds 5(a-j) were calculated. The data of minimum inhibitory concentration for antibacterial and antifungal are presented in Table 4 and Table 5. Synthesized compounds were tested for their ability to inhibit the growth of bacterial and fungal strains at different concentrations that is 100, 50, 25, and 12.5 g/mL. The MIC zone of inhibition for antibacterial and antifungal activity of the compounds 5(a-j) are displayed in Figure 3 and Figure 4. . All of the synthesized compounds had promising MIC values against bacterial and fungal strains 24.
Table 4: MIC of synthesized Compounds 5(a-j) using serial dilution technique at different concentrations (100mg/ml, 50mg/ml, 25mg/ml and 12.5mg/ml) against two bacterial strains K.pneumoniae and B.subtilis
Compounds |
Concentration |
K.pneumoniae |
B.subtilis |
5a |
100mg/ml |
19±0.94 |
13±0.81 |
50mg/ml |
18±1.24 |
11±0.94 |
|
25mg/ml |
16±0.81 |
11±1.24 |
|
12.5mg/ml |
14±0.47 |
10±0.81 |
|
Standard |
24±1.69 |
22±0.94 |
|
5b |
100mg/ml |
16±1.88 |
12±0.94 |
50mg/ml |
13±0.94 |
12±1.24 |
|
25mg/ml |
11±0.47 |
10±0.81 |
|
12.5mg/ml |
11±1.24 |
10±0.94 |
|
Standard |
24±0.81 |
22±0.47 |
|
5c |
100mg/ml |
13±1.69 |
14±0.81 |
50mg/ml |
13±1.24 |
11±0.94 |
|
25mg/ml |
12±0.81 |
11±1.24 |
|
12.5mg/ml |
11±0.47 |
10±0.94 |
|
Standard |
24±0.94 |
22±0.81 |
|
5d |
100mg/ml |
15±1.69 |
18±0.47 |
50mg/ml |
15±1.88 |
18±0.94 |
|
25mg/ml |
12±0.47 |
14±0.94 |
|
12.5mg/ml |
11±0.94 |
12±1.24 |
|
Standard |
24±0.81 |
22±1.24 |
|
5e |
100mg/ml |
17±1.69 |
14±0.47 |
50mg/ml |
15±0.47 |
14±0.94 |
|
25mg/ml |
12±0.81 |
11±1.24 |
|
12.5mg/ml |
12±0.94 |
11±0.47 |
|
Standard |
24±1.24 |
22±0.94 |
|
5f |
100mg/ml |
17±1.69 |
11±0.94 |
50mg/ml |
16±1.88 |
11±0.47 |
|
25mg/ml |
14±0.47 |
10±0.94 |
|
12.5mg/ml |
13±0.94 |
10±0.81 |
|
Standard |
24±0.81 |
22±1.24 |
|
5g |
100mg/ml |
16±1.24 |
16±0.47 |
50mg/ml |
15±0.47 |
13±0.94 |
|
25mg/ml |
14±1.69 |
10±1.24 |
|
|
12.5mg/ml |
12±0.81 |
10±0.94 |
Standard |
24±0.94 |
22±1.24 |
|
5h |
100mg/ml |
14±1.88 |
14±0.94 |
50mg/ml |
12±0.47 |
11±0.81 |
|
25mg/ml |
11±0.81 |
11±0.47 |
|
12.5mg/ml |
11±0.94 |
11±1.24 |
|
Standard |
24±1.24 |
22±0.94 |
|
5i |
100mg/ml |
12±0.81 |
15±1.69 |
50mg/ml |
11±0.94 |
12±0.47 |
|
25mg/ml |
11±1.69 |
10±0.81 |
|
12.5mg/ml |
11±0.47 |
10±0.94 |
|
Standard |
24±0.94 |
22±1.24 |
|
5j |
100mg/ml |
10±1.88 |
16±0.81 |
50mg/ml |
10±1.24 |
14±0.47 |
|
25mg/ml |
11±0.94 |
11±1.24 |
|
12.5mg/ml |
11±0.81 |
11±0.94 |
|
Standard |
24±0.47 |
22±0.81 |
*Std = Ascorbic acid
*Each value is expressed as the mean ± SD of three replicates for the zone of inhibition.
Figure 3: MIC of antibacterial activity bar graph representing the zone of inhibition of synthesized compounds 5(a-j). |
Table 5: MIC of synthesized Compounds 5(a-j) using serial dilution technique at different concentrations (100mg/ml, 50mg/ml, 25mg/ml and 12.5mg/ml) against two fungal strains C.albicans and A.niger
Compound |
Concentration |
C.albicans |
A.niger |
5a |
100mg/ml |
19±0.81 |
12±0.94 |
50mg/ml |
16±0.94 |
12±1.24 |
|
25mg/ml |
15±1.24 |
10±0.81 |
|
12.5mg/ml |
14±0.81 |
11±0.47 |
|
Standard |
25±0.94 |
27±1.69 |
|
5b |
100mg/ml |
16±0.94 |
11±1.88 |
50mg/ml |
15±1.24 |
11±0.94 |
|
25mg/ml |
13±0.81 |
10±0.47 |
|
12.5mg/ml |
11±0.94 |
10±1.24 |
|
Standard |
25±0.47 |
27±0.81 |
|
5c |
100mg/ml |
13±0.81 |
13±1.69 |
50mg/ml |
12±0.94 |
13±1.24 |
|
25mg/ml |
11±1.24 |
10±0.81 |
|
12.5mg/ml |
11±0.94 |
11±0.47 |
|
Standard |
25±0.81 |
27±0.94 |
|
5d |
100mg/ml |
15±0.47 |
17±1.69 |
50mg/ml |
14±0.94 |
15±1.88 |
|
25mg/ml |
12±0.94 |
14±0.47 |
|
12.5mg/ml |
12±1.24 |
13±0.94 |
|
Standard |
25±1.24 |
27±0.81 |
|
5e |
100mg/ml |
17±0.47 |
14±1.69 |
50mg/ml |
15±0.94 |
13±0.47 |
|
25mg/ml |
14±1.24 |
11±0.81 |
|
12.5mg/ml |
12±0.47 |
11±0.94 |
|
Standard |
25±0.94 |
27±1.24 |
|
5f |
100mg/ml |
17±0.94 |
10±1.69 |
50mg/ml |
16±0.47 |
10±1.88 |
|
25mg/ml |
14±0.94 |
10±0.47 |
|
12.5mg/ml |
13±0.81 |
10±0.94 |
|
Standard |
25±1.24 |
27±0.81 |
|
5g |
100mg/ml |
16±0.47 |
15±1.24 |
50mg/ml |
15±0.94 |
13±0.47 |
|
25mg/ml |
13±1.24 |
12±1.69 |
|
12.5mg/ml |
12±0.94 |
12±0.81 |
|
Standard |
25±1.24 |
27±0.94 |
|
5h |
100mg/ml |
14±0.94 |
14±1.88 |
50mg/ml |
14±0.81 |
14±0.47 |
|
25mg/ml |
12±0.47 |
11±0.81 |
|
12.5mg/ml |
11±1.24 |
10±0.94 |
|
Standard |
25±0.94 |
27±1.24 |
|
5i |
100mg/ml |
14±1.69 |
15±0.81 |
50mg/ml |
13±0.47 |
13±0.94 |
|
25mg/ml |
11±0.81 |
11±1.69 |
|
|
12.5mg/ml |
11±0.94 |
11±0.47 |
Standard |
25±1.24 |
27±0.94 |
|
5j |
100mg/ml |
12±0.81 |
18±1.88 |
50mg/ml |
11±0.47 |
15±1.24 |
|
25mg/ml |
10±1.24 |
12±0.94 |
|
12.5mg/ml |
10±0.94 |
12±0.81 |
|
Standard |
25±0.81 |
27±0.47 |
*STD=Fluconazole Compound
*Each value is expressed as the mean ± SD of three replicates for the zone of inhibition.
Figure 4: MIC of antifungal activity bar graph representing the zone of inhibition of synthesized compounds 5(a-j). |
Antioxidant Activity (DPPH Assay)
The ability of synthetic compounds 5(a-j) and ascorbic acid(standard) to scavenge free radicals was assessed based on their ability to do so with regard to the DPPH free radical. Different concentrations of the compounds as well as the standard (5, 10, 15, 20 and 25 mg/ml) were prepared in methanol. In clean and clearly labeled test tubes, 3 ml of DPPH solution (0.002% in methanol) was blended with 05, 10, 15, 20 and 25 mg/mL of different concentrations of synthesized compounds and standard individually. Methanol was added to the solution to bring it up to 4 mL. A UV-Visible Spectrophotometer was used to measure the optical density at 517 nm after the tubes had been incubated at room temperature in the dark for 30 minutes. We measured the absorbance of the DPPH control. The Results are graphically represented in Figure 5 and summarised in Table 6. Using the formula, the scavenging activity was determined.
Scavenging activity (%) = A-B/A×100,
Where A is the absorbance of DPPH and B is the absorbance of DPPH in standard combination [25].
Table 6: Antioxidant activity of synthesized compounds 5(a-j) using DPPH methods at different concentrations (400µg/ml, 200µg/ml, 100 µg/ml, 50µg/ml, and 25µg/ml)
|
Scavenging activity of different Concentration (µg/ml) in% |
||||
Compound |
400µg/ml |
200µg/ml |
100µg/ml |
50µg/ml |
25µg/ml |
5a |
97.86±0.28 |
95.21±0.41 |
92.16±0.7 |
87.45±0.48 |
86.15±0.32 |
5b |
94.27±0.8 |
93.11±0.39 |
89.05±0.25 |
84.15±0.56 |
82.33±0.75 |
5c |
83.88±0.57 |
80.56±0.79 |
78.56±0.91 |
75.35±0.87 |
72.22±0.25 |
5d |
92.25±0.66 |
90.16±0.45 |
88.19±1.13 |
84.27±0.22 |
82.06±0.15 |
5e |
95.19±0.73 |
95.82±0.52 |
90.15±0.78 |
86.12±0.61 |
84.34±0.52 |
5f |
96.18±0.38 |
95.61±0.76 |
91.42±0.48 |
86.71±0.64 |
85.23±0.17 |
5g |
94.54±0.53 |
93.25±0.18 |
92.79±0.31 |
85.98±0.34 |
84.63±0.26 |
5h |
88.82±0.45 |
82.09±0.55 |
81.91±0.83 |
79.25±0.14 |
76.41±0.31 |
5i |
86.91±0.36 |
81.11±0.43 |
80.08±0.51 |
77.42±0.3 |
75.33±0.37 |
5j |
84.02±1.16 |
81.23±0.13 |
79.5±0.69 |
76.25±0.65 |
74.14±0.41 |
Std |
98.68±0.31 |
96.72±0.77 |
94.29±0.54 |
90.12±0.43 |
88.38±0.38 |
*Std = Ascorbic acid
*Each value is expressed as the mean ± SD of three replicates for the zone of inhibition.
Figure 5: Antioxidant activity bar graph representing the percentage of antioxidant potency of synthesized compounds 5(a-j). |
Molecular docking study
The reported approach was used to complete the molecular docking study 26, 27. The In-Silco molecular docking procedure was used on the anticancer receptor, PDB code 2A91, the Protein Data Bank (PDB; http://www.rcsb.org/pdb) provided the receptor’s crystal structure. Prior to screening, the water molecules and heteroatoms were eliminated. Utilizing the protein preparation module of the HEX modelling package 8.0, the receptor structure was built before being used in the docking investigation. During the protein preparation, all hetero and water molecules were removed from the crystal structure except water molecules within 5Å from the ligand. The 3D structure of each ligand together with the receptor binding interactions were visualised to optimise quality by discovery studio 3.2. The results of the In-silico molecular docking provide important information on the capacity of recently synthesised drugs to attach to the receptor active sites. Thus, we performed a wet study of anticancer activity using the acquired docking values as a reference. The findings of binding scores of synthesized compounds 5(a-j) are indexed in Table 7 and the 2D and 3D binding orientation of prepared compounds 5(a-j) with receptor 2A91is displayed in Figure 6 to Figure 15.
Table 7: Binding energies and types of binding interaction of synthesized compounds 5(a-j) on the anticancer receptor, PDB code 2A91
Compounds Code |
H-bond |
Pi-Lone pair interaction |
Docking score |
Pi-alkyl interaction |
Alkyl-Alkyl Interaction |
5a |
TYR29 THR8TH R8THR 8ASN3 8THR 8GLU40 |
TYR29A SN38TH R8LEU39 TYR62TY R62ASN38 |
-311.09 |
LEU415 |
TYR62 GLU40 LEU64 LEU39 ASN281 ARG411 |
5b |
LYS11 ASP9 ARG26 ASP23 ARG77 ASP55 ARG82 GLU58 ARG122 ASP190 ARG122 GLU189 ARG136 ASP97 ARG167 ASP144 |
THR8 TYR29 THR8 GLY418 ARG13 ASN417 |
-317.99 |
TYR62 TYR62 LEU39 |
HIS236 GLN218 LYS348 GLU384 GLU383 ASN406 GLY418 |
5c |
SER442 GLY412 GLY7 TYR29 GLY7 ASN38 THR8 GLY418 LEU39 TYR29 |
GLY418 SER442 THR8 TYR29 GLY418 |
-303.30 |
THR8 TYR62 TYR62 |
LEU39 VAL63 |
5d |
GLY418 LEU415 SER442 SER442 GLY7GLY7 ASN38 THR8 GLY418 |
GLY7 THR8 ASN38 LEU415 SER442 |
-310.17 |
TYR62 |
TYR62 LEU39 |
5e |
LYS11 TYR62 ASN38 ASN38 THR8 ASN38 ASN38 GLN85 |
GLY418 LEU415 SER442 ARG411 SER442 |
-316.21 |
GLY418 LEU415 GLY418 TYR62 |
TYR62 LEU415 TYR62 LEU39 |
5f |
GLY7 GLN36 THR8 ASN38 THR8 THR8 ASP9 ASN417 |
MET10 LYS11 LEU12 ARG13 LEU14 |
-295.31 |
PRO18 GLU19 THR20 |
GLY7 ASN38 LEU39 LEU415 SER442 |
5g |
ASN38 LEU39 TYR62 GLU40 ASN38 TYR62 ASN38 TYR62 GLU40 TYR62 GLY418 LEU415 |
ARG411 GLY412 GLY7 ASN38 THR8 GLY418 |
-314.58 |
TYR62 ARG411 GLY418 TYR62 |
TYR62 LEU39 |
5h |
GLY7 THR8 ASP9 MET10 LYS11 LEU12 ARG13 |
LEU14 PRO15 ALA16 SER17 PRO18 |
-318.29 |
THR8 GLY418 ARG411 SER442 ARG411 TYR62 |
TYR62 GLY418 ASN38 |
5i |
THR8 ASN38 ASN38 THR8 LEU39 TYR62 GLU40 ASN38 TYR62 ASN38 TYR62 GLU40 TYR62 |
TYR29 GLN30 GLY31 CYS32 GLN33 VAL34 VAL35 |
-322.59 |
GLY7 TYR29 TYR62 TYR62 |
TYR62 LEU64 LEU39 VAL63 |
5j |
THR8 ASP9 MET10 LYS11 LEU12 ARG13 LEU14 PRO15 |
ASN68 GLN69 VAL70 ARG71 GLN72 VAL73 PRO74 |
-320.29 |
PHE87 GLU88 ASP89 ASN90 TYR91 |
THR165 ASN166 ARG167 SER168 |
Figure 6: 2D and 3D bonding interactions of receptor 2A91with compound 5a |
Figure 7: 2D and 3D bonding interactions of receptor 2A91 with compound 5b |
Figure 8: 2D and 3D bonding interactions of receptor 2A91 with compound 5c |
Figure 9: 2D and 3D bonding interactions of receptor 2A91 with compound 5d |
Figure 10: 2D and 3D bonding interactions of receptor 2A91 with compound 5e. |
Figure 11: 2D and 3D bonding interactions of receptor 2A91 with compound 5f. |
Figure 12: 2D and 3D bonding interactions of receptor 2A91 with compound 5g |
Figure 13: 2D and 3D bonding interactions of receptor 2A91 with compound 5h |
Figure 14: 2D and 3D bonding interactions of receptor 2A91 with compound 5i |
Figure 15: 2D and 3D bonding interactions of receptor 2A91 with compound 5j. |
Anticancer activity [Cell preparation and cell viability]
The in-vitro anticancer activity of the synthesized compounds 5(a-j) were assessed using 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT) against an human cancer cell line MCF-7 (cancer breast)[28]. The assay was observed to be entirely relying on the decrease of the tetrazolium salt via mitochondrial dehydrogenase of viable cells in order to produce a blue formazan product dissolved in DMSO, which was measured at 570nm. With the aid of graph Pad Prism Version 5.1, IC50 (µM) data of synthesized compounds were estimated and Paclitaxel was utilized as positive control. The human cancer cell lines were procured from National Centre for Cell Science, Pune, India and Dulbecco’s Modified Eagle Medium(DMEM) with low glucose (Cat No-11965-092, Gibco, Invitrogen) was used to culture the cell lines enhanced with 10% fetal bovine serum(CatNo-10270106,Gibco,Invitrogen) and 1% antimycotic (Cat No-15240062, Thermo fisher Scientific) was used for cell culture. Untreated cells were considered as control. The results of the anti-cancer screening are indexed in Table 8 and represented in Figure 16. In addition to this, IC50 values of synthesized compounds were also estimated, which are indexed in Table 9 and depicted in Figure 17.
The cells were cultivated in a 96-well flat-bottom microplate and stored overnight at 37ºC in 95% humidity and 5% CO2. Different sample concentrations (400, 200, 100, 50, 25, 12.5μg/ml) were treated. For an additional 48 hours, the cells were incubated and the wells were washed twice with PBS. Further, 20μL of the MTT staining solution was introduced to individual well and plates were incubated at 37ºC. After 4 hours, 100 mL of DMSO was added to each well to dissolve the formazan crystals, and using a microplate reader, the absorbance at 570 nm was measured. The following formulae were used to calculate the cytotoxicity:
Table 8: In-vitro cytotoxicity of synthesized compounds (5a, 5b, 5d, 5g, 5i) against MCF-7 cell lines
Compound |
MCF-7t5r |
|||||
400 |
200 |
100 |
50 |
25 |
12.5 |
|
5a |
21±0.47 |
23±0.11 |
26±1.25 |
28±0.57 |
32±0.22 |
39±0.11 |
5b |
22±1.15 |
26±1.52 |
29±0.19 |
31±0.47 |
36±0.65 |
43±1.74 |
5d |
23±0.65 |
25±0.33 |
28±1.15 |
30±1.52 |
35±0.47 |
41±0.17 |
5g |
25±0.57 |
28±1.15 |
30±0.22 |
36±0.58 |
39±0.18 |
45±1.25 |
5i |
28±0.90 |
30±0.13 |
34±1.15 |
39±0.47 |
45±1.24 |
51±0.33 |
Negative Control |
100 |
*Each value is expressed as mean ± SD of three replicates for the zone of inhibition
Figure 16: In-vitro cytotoxic potency of synthesized compounds |
Table 9: IC50 values of synthesized compounds (5a, 5b, 5d, 5g, 5i) against MCF-7 cell lines
Compounds |
MCF-7 |
IC50(µg/mL) |
|
5a |
15.28±0.65 |
5b |
17.63±0.58 |
5d |
13.68±1.74 |
5g |
10.66±1.15 |
5i |
08.77±1.52 |
Paclitaxel (Positive control) |
0.32±0.65 |
Figure 17: IC50 values of synthesized compounds against MCF-7 cell line in comparison with Paclitaxel (Positive control). |
Discussions
A cyclized product of chloro substituted 1, 3-benzoxazole-2-thiol 2 compound has been prepared from 4-Chloro-2-amino-phenol by treating it with carbon disulphide and potassium hydroxide in the presence of methanol [19].The SH group which is present in the compound 2 was undergo substitution reaction with ethyl chloroacetate with the addition of acetone to produce thio ether product ethyl [(4-chloro-1, 3-benzoxazol-2-yl) sulfanyl] acetate 3 [20]. A further treatment of compound 3 with hydrazine hydrate led to the formation of peptide or amide bond formation by the elimination of ethyl alcohol to ptoduce an intermediate 2-[(4-chloro-1,3-benzoxazol-2-yl)sulfanyl]acetohydrazide 4 [21]. 1H NMR characterized compound 4 as having two singlets at δ 4.490 and δ 9.414 ppm due to the presence of -NH2 and -NH protons respectively. As a result of reacting intermediate 4 with varied aromatic aldehydes, the NH2 group in the product 4 reacts with aldehyde to produce imine(C=N) bond through condensation reaction, derivatives 2-[(4-chloro-1, 3-benzoxazol-2-yl) sulfanyl]-N’-[-phenylmethylidene] acetohydrazides 5(a-j) have been obtained [22]. The newly synthesized molecules displayed intense absorbance band at 1660cm-1 for -NH and 1692 cm-1 for -C=O groups in IR spectrum and the 1H NMR revealed a peak at δ 11.836 (bs, -NH) justifying the disappearance of NH2 proton and the formation of new ring by insertion reaction [29]. In addition, the mass peak also correlated with the molecular weight of the synthesized molecules.
Studies have also been performed on the synthesized molecules 5(a-j) for their antibacterial, antifungal, MIC, antioxidant and cytotoxic activity. Based on the results of antibacterial and antifungal studies, few compounds have demonstrated potent zone of inhibitions, as shown in Table 2 and Table 3 and Figures 1 and 2. Comparatively to standard drugs Chloramphenicol and Fluconazole, compounds 5a, 5b, 5d, 5e, 5g and 5h displayed marked zones of inhibition against bacteria and fungi. At different concentrations, the compounds were explored for their Minimum Inhibitory Concentration (MIC) to determine their distinct zones of inhibition against bacteria and fungi and Tables 4 and 5 and Figures 3 and 4 illustrate the results of this analysis. A marked zone of inhibition was noted for compounds 5a, 5b, 5d, 5e, 5g and 5h against gram positive and gram negative bacteria at four various concentrations (100g/ml, 50g/ml, 25g/ml and 12.5g/ml). In spite of concentration differences, chloro, nitro, methoxy and hydroxy substituted benzoxazole derivatives showed significant efficacies. This observation is favoured by antioxidant activity, which was done with effective free radical scavenge as outlined in Table 6 and Figure 5 respectively. The derivatives 5(a-j) exhibited powerful free radical scavenging properties.
In order to become better acquainted with the binding energies and types of binding interactions of the prepared compounds, molecular docking was performed on the synthesized compounds. Compared to the rest of the prepared compounds, the synthesized compound 5i possessed admirable binding scores (-322.59 kcal/mol). The binding score obtained from the molecular docking study and also by considering the similar structures of newly prepared compounds, where only the position of substituent differs, few of the selected compounds were screened for their cytotoxic activity against MCF-7 cell line and the observations are tabulated in Table 8 and represented in Figure 16 [30]. Following the binding scores of docking study and considering that the only difference between newly prepared compounds is the position of the substituents, few compounds were selected for cytotoxic testing against MCF-7 cells. At the least concentration of 12.5 g/mL, both compounds 5g and 5i displayed impressive inhibitory activity of 45% and 51%, respectively. Also, compound 5i demonstrated potential activity for MCF-7 cell line with an IC50 value of 8.77µg/mL
Conclusion
Current work comprises of series of the synthesis of novel 2-[(4-chloro-1,3-benzoxazol-2-yl)sulfanyl]-N’-[(-phenylmethylidene]acetohydrazide 5(a-j) derivatives. The expected target molecules were prepared, structurally confirmed by using IR, 1H NMR, 13C NMR and mass spectral analysis. They were also subjected to various biological activities, which includes antimicrobial, antioxidant and in-vitro cytotoxic activity. Among the synthesized compounds 5g and 5i were found to exhibit increased potency and considered as potential molecules for further toxicological development of drugs.
Acknowledgement
The authors are thankful to the Directorate of minorities, Bangalore, Karnataka, India, for financial support. The authors are grateful to the Principal, Sahyadri Science College, Shivamogga for providing the necessary research facilities. We are also grateful to Sophisticated Analytical Instruments Facility, Mysore University, Karnataka India, MIT Manipal for providing 1HNMR, 13C NMR and Mass spectral facilities.
Conflict of interest
There is no conflict of interest.
Funding Sources
There is no funding sources
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